The detailed information of tRNA gene sequence


Sequence ID>SRA1003845
Genome IDSRR002327.227510
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 204
End posion on genome 115
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtctggaca
tRNA gene sequence 
GGAAGGGTGGATGAGCGGTTTAAGTCATACGCCTGGAAAGCGTACGTGGGGTTAAACCCA
CCGCGGGTTCGAATCCCGCCTCTTCCGCCA
Downstream region at tRNA end position 
aagttaaaaa
Secondary structure (Cloverleaf model)
>SRA1003845	Ser	GGA
                   a      GCCA aagttaaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CGTGGGGTTAAACCCACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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