The detailed information of tRNA gene sequence


Sequence ID>SRA1003846
Genome IDSRR002327.232542
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 161
End posion on genome 72
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tacctggtac
tRNA gene sequence 
GGAAGTGTGGCCGAGCGGTTGAAGGCACTAGTCTTGAAAACTAGCGAGGATGAGAGTCCT
TCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
atttttgcct
Secondary structure (Cloverleaf model)
>SRA1003846	Ser	TGA
                   c      GCCA atttttgcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGAGGATGAGAGTCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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