The detailed information of tRNA gene sequence


Sequence ID>SRA1003864
Genome IDSRR002327.243291
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 112
End posion on genome 188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acggtagtgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
acaacaaagc
Secondary structure (Cloverleaf model)
>SRA1003864	Met	CAT
                   t      ACCA acaacaaagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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