The detailed information of tRNA gene sequence


Sequence ID>SRA1003872
Genome IDSRR002327.252213
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 110
End posion on genome 35
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atcggggttt
tRNA gene sequence 
AGGGCAGTAGCTCCAATGGTAGAGCAACCGATTCCAAATCGGTTTGTTGTGGGTTCGAGT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
agtttaaaat
Secondary structure (Cloverleaf model)
>SRA1003872	Trp	CCA
                   t      GCCA agtttaaaat
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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