The detailed information of tRNA gene sequence


Sequence ID>SRA1003879
Genome IDSRR002328.3824
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 171
End posion on genome 260
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaaggctt
tRNA gene sequence 
GGAAGCGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCGACGGGGCAACTCGT
TCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003879	Ser	TGA
                   t      GCCA aannnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGACGGGGCAACTCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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