The detailed information of tRNA gene sequence


Sequence ID>SRA1003881
Genome IDSRR002328.5078
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 170
End posion on genome 245
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatttgcagc
tRNA gene sequence 
AGGGGTTTAGCTCCAGTGGTAGAGCGAGCGACTCCAAATCGCTAGGTCGTGGGTTCGAAT
CCCTCAGCCCCTGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003881	Trp	CCA
                   c      GCCA nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     C T C C C     A
      G A C        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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