The detailed information of tRNA gene sequence


Sequence ID>SRA1003888
Genome IDSRR002328.11111
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 56
End posion on genome 146
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaaggctt
tRNA gene sequence 
GGAAGCGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAAACCGGCGACGGGGCAACCCG
TTCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aatttcaaca
Secondary structure (Cloverleaf model)
>SRA1003888	Ser	TGA
                   t      GCCA aatttcaaca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     GCGACGGGGCAACCCGTTC
                    C - G
                    C   C
                    G - C
                    G   A
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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