The detailed information of tRNA gene sequence


Sequence ID>SRA1003894
Genome IDSRR002328.15992
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ngctggctct
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGTAGGTTCGAA
TCCTGCCACCCCGACCT
Downstream region at tRNA end position 
gaaaattgaa
Secondary structure (Cloverleaf model)
>SRA1003894	Pro	CGG
                   t      ACCT gaaaattgaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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