The detailed information of tRNA gene sequence


Sequence ID>SRA1003895
Genome IDSRR002328.16781
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 86
End posion on genome 162
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttttcac
tRNA gene sequence 
GAGTCAGTAGCTCACTTTGGCAGAGCGTCGGTCTCCAAAACCGGAGGTACGCGGTTCGAT
CCCGTGCTGATTCGCCA
Downstream region at tRNA end position 
tgcttaaaga
Secondary structure (Cloverleaf model)
>SRA1003895	Trp	CCA
                   c      GCCA tgcttaaaga
                     G - C
                     A - T
                     G + T
                     T - A
                     C - G
                     A - T
                     G - C          C T
                    T     G T G C C     A
      T C A        A      | + | | |     G
    T       C T C G       C G C G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTA
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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