The detailed information of tRNA gene sequence


Sequence ID>SRA1003896
Genome IDSRR002328.16781
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 170
End posion on genome 244
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatgcttaa
tRNA gene sequence 
AGACGTGTAGCTCAGTGGCAGAGCGCCGCCCTCATAAGGCGAAAGTCGATGGATCGTTCC
CATCCACGTCTACCA
Downstream region at tRNA end position 
acttcctccc
Secondary structure (Cloverleaf model)
>SRA1003896	Met	CAT
                   a      ACCA acttcctccc
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     C T A C C     T
        G A        A      | | | | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 A T
      G     G A G C
        C A        G     AAGTC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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