The detailed information of tRNA gene sequence


Sequence ID>SRA1003902
Genome IDSRR002328.20744
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 157
End posion on genome 249
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagaaactcc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTCTAAAGCT
CCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tattaaannn
Secondary structure (Cloverleaf model)
>SRA1003902	Ser	GCT
                   c      GCCA tattaaannn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGGGGTCTAAAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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