The detailed information of tRNA gene sequence


Sequence ID>SRA1003913
Genome IDSRR002328.29346
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 95
End posion on genome 186
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgtttttct
tRNA gene sequence 
GGAGACGTGGGAGAGTGGTCTAATCCAGCGCCTTGCTAAGGCGTCGTACCCCGCAAGGGG
TACCGTGAGTTCGAATCTCACCGTCTCCGCCA
Downstream region at tRNA end position 
tttatcacca
Secondary structure (Cloverleaf model)
>SRA1003913	Ser	GCT
                   t      GCCA tttatcacca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A G G       G T G A G     C
    G         | | |                 T T
    T       A T C C
      C T A        A     CGTACCCCGCAAGGGGTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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