The detailed information of tRNA gene sequence


Sequence ID>SRA1003928
Genome IDSRR002328.42726
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 98
End posion on genome 5
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccggccccac
tRNA gene sequence 
GGAGCTGTGACCGAGTGGCCCGAAGGTGCTCCCCTGCTAAGGGAGTATGTGGGCAAAACC
TGCATCGAGGGTTCGAATCCCTCCGGCTCCGCCA
Downstream region at tRNA end position 
acgtnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003928	Ser	GCT
                   c      GCCA acgtnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
    G T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  C           | | |                 T T
  C         A G G T
    C G A          G     TATGTGGGCAAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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