The detailed information of tRNA gene sequence


Sequence ID>SRA1003936
Genome IDSRR002328.49123
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 85
End posion on genome 160
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cccaacccgc
tRNA gene sequence 
GCCGGTTTAGCTCAGTTGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGCGGGTTCGACT
CCTGCAACCGGCACCA
Downstream region at tRNA end position 
tttagatcaa
Secondary structure (Cloverleaf model)
>SRA1003936	Thr	TGT
                   c      ACCA tttagatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T C
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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