The detailed information of tRNA gene sequence


Sequence ID>SRA1003963
Genome IDSRR002328.61086
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 157
End posion on genome 82
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atttcaactt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCGCCTGGTTTGGGACCAGGATGTCGTAGGTTCGAA
TCCTATCGCCCGACCAt
Downstream region at tRNA end position 
attcgtaagc
Secondary structure (Cloverleaf model)
>SRA1003963	Pro	TGG
                   t      CCAt attcgtaagc
                     C   A
                     G   G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G T A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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