The detailed information of tRNA gene sequence


Sequence ID>SRA1003966
Genome IDSRR002328.62130
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 131
End posion on genome 42
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggcaggttt
tRNA gene sequence 
GGAGAGATGCCTGAGTGGCCGAAAGGAACGGTTTGCTAAATCGTCGTACGGGTCACACTG
TACCGTGGGTTCGAATCCCACTCTCTCCGCag
Downstream region at tRNA end position 
gaatatttta
Secondary structure (Cloverleaf model)
>SRA1003966	Ser	GCT
                   t      GCag gaatatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACGGGTCACACTGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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