The detailed information of tRNA gene sequence


Sequence ID>W1810252135
Genome IDPQGC01000096
Search identical group
Phylum/ClassBacillota
SpeciesLactonifactor longoviformis DSM 17459 [PQGC]
Start position on genome 11854
End posion on genome 11945
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtggtttT
tRNA gene sequence 
GGAGAAGTACCCAAGCTGGCTGAAGGGGCTCCCCTGGAAAGGGAGTAGGTCGTTAATAGC
GGCGCGAGGGTTCAAATCCCTCCTTCTCCGTtc
Downstream region at tRNA end position 
ttaattatct
Secondary structure (Cloverleaf model)
>W1810252135	Ser	GGA
                   T      GTtc ttaattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     A
  G         A C C C       G A G G G     C
  G           | | |                 T T
  C         A G G G
    T G A          G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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