The detailed information of tRNA gene sequence


Sequence ID>SRA1003982
Genome IDSRR002328.71442
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 283
End posion on genome 193
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaccaacct
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGTAGTTTGCTAAACTGCCGTAGCTCTAAAGGTT
ACCGGGGGTTCGAATCCCCCCCTCTCCACTA
Downstream region at tRNA end position 
taatgttggg
Secondary structure (Cloverleaf model)
>SRA1003982	Ser	GCT
                   t      ACTA taatgttggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTAGCTCTAAAGGTTACC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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