The detailed information of tRNA gene sequence


Sequence ID>SRA1003989
Genome IDSRR002328.78347
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 253
End posion on genome 166
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcggcatgtt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGAATGTACCTGACTCGAAATCAGGCGTACCGCAAGGTACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcaacaccta
Secondary structure (Cloverleaf model)
>SRA1003989	Ser	CGA
                   t      GCCA gcaacaccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    C       A T G T
      C G A        A     CGTACCGCAAGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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