The detailed information of tRNA gene sequence


Sequence ID>SRA1004001
Genome IDSRR002328.90346
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 185
End posion on genome 98
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaagcgtc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGTACCTGACTCGAAATCAGGCGTACCGCAAGGTATC
CGGGGTTCGAATCCCCGCCTCTCCGCCA
Downstream region at tRNA end position 
agagcatgtt
Secondary structure (Cloverleaf model)
>SRA1004001	Ser	CGA
                   c      GCCA agagcatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C G G G G     C
    G         | | +                 T T
    T       A T G T
      T G A        A     CGTACCGCAAGGTATC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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