The detailed information of tRNA gene sequence


Sequence ID>SRA1004006
Genome IDSRR002328.91900
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 115
End posion on genome 204
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcggaacgct
tRNA gene sequence 
GGATCGGTGGATGAGCGGTTTAAGTCACACGCCTGGAAAGCGTGCGAGGGGTCAAACCCT
CCGCGGGTTCGAATCCCGCCTGATCCGCCA
Downstream region at tRNA end position 
gcatacatgt
Secondary structure (Cloverleaf model)
>SRA1004006	Ser	GGA
                   t      GCCA gcatacatgt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CGAGGGGTCAAACCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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