The detailed information of tRNA gene sequence


Sequence ID>SRA1004022
Genome IDSRR002328.99878
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 216
End posion on genome 140
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGAGTGTTCGAA
TCACTCCGTCCCGACCA
Downstream region at tRNA end position 
gagtagacga
Secondary structure (Cloverleaf model)
>SRA1004022	Pro	GGG
                   n      ACCA gagtagacga
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C T C A C     A
      C G A        A      | | | | |     G
    C       C G C G       G A G T G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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