The detailed information of tRNA gene sequence


Sequence ID>SRA1004027
Genome IDSRR002328.103448
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 18
End posion on genome 92
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cactggtttt
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtc
Downstream region at tRNA end position 
taacaacttt
Secondary structure (Cloverleaf model)
>SRA1004027	Ile	GAT
                   t      ACtc taacaacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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