The detailed information of tRNA gene sequence


Sequence ID>SRA1004029
Genome IDSRR002328.104679
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 174
End posion on genome 99
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcggctcaa
tRNA gene sequence 
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCCGCCCTGCAA
Downstream region at tRNA end position 
gtcccctcgc
Secondary structure (Cloverleaf model)
>SRA1004029	Trp	CCA
                   a      GCAA gtcccctcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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