The detailed information of tRNA gene sequence


Sequence ID>SRA1004033
Genome IDSRR002328.105765
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 105
End posion on genome 29
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
acaggcttga
tRNA gene sequence
GGCGCTTTAGCTCAGCCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCGAA
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position
aaataatact
Secondary structure (Cloverleaf model)
>SRA1004033	Met	CAT
                   a      ACCA aaataatact
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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