The detailed information of tRNA gene sequence


Sequence ID>SRA1004040
Genome IDSRR002328.110880
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 100
End posion on genome 26
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagccgata
tRNA gene sequence 
CGCGGGATGGAGCAGCGGCAGCTCGCGTGGCTCATAACCACGAGGTCCCAGGTTCGAGTC
CTGGTCCCGCAACCA
Downstream region at tRNA end position 
aaagaaaaca
Secondary structure (Cloverleaf model)
>SRA1004040	Met	CAT
                   a      ACCA aaagaaaaca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     G G T C C     A
        G A        G      | | | | |     G
      C     C G A G       C C A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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