The detailed information of tRNA gene sequence


Sequence ID>SRA1004046
Genome IDSRR002328.113800
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 120
End posion on genome 44
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcaaactatt
tRNA gene sequence 
GGGGGATTAGCTCATTTGGCTAGAGCGCTTGCCTGGCAGGCAAGAGGTGGTCGGTTCGAA
TCCGATATTCTCCACCA
Downstream region at tRNA end position 
gtaataccaa
Secondary structure (Cloverleaf model)
>SRA1004046	Ala	GGC
                   t      ACCA gtaataccaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T A G C C     A
      T T A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTG
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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