The detailed information of tRNA gene sequence


Sequence ID>SRA1004047
Genome IDSRR002328.113856
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 96
End posion on genome 172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgccggtgc
tRNA gene sequence 
GCGCCTGTAGCTCAATTGGTTAGAGCTGGCGGCTCATAACCGCTCGGTTGTAGGTTCGAG
TCCTACCGGGCGCACCA
Downstream region at tRNA end position 
ttttcgatct
Secondary structure (Cloverleaf model)
>SRA1004047	Met	CAT
                   c      ACCA ttttcgatct
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     CGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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