The detailed information of tRNA gene sequence


Sequence ID>SRA1004048
Genome IDSRR002328.113967
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 113
End posion on genome 41
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atactcgtat
tRNA gene sequence 
TGCGGGGTAGAGCAATGGTAGCTCGGCTGTTTCATACGCAGCAGGTTGTCGGTTCGAGTC
CGGTCTCCGCCACac
Downstream region at tRNA end position 
tcgggtagct
Secondary structure (Cloverleaf model)
>SRA1004048	Met	CAT
                   t      ACac tcgggtagct
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T G G C C     A
        A A        A      + + | | |     G
      T     C G A G       G T C G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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