The detailed information of tRNA gene sequence


Sequence ID>SRA1004049
Genome IDSRR002328.115618
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 59
End posion on genome 131
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataaattatg
tRNA gene sequence 
TGGGAGCGTAATTTAATGGTAAAATAGTGGTTTTCAAAACCGAAATTGGTGGTTCAATTC
CATCCGTTCCTGAaaa
Downstream region at tRNA end position 
aagtgtattc
Secondary structure (Cloverleaf model)
>SRA1004049	SeC	TCA
                   g      Aaaa aagtgtattc
                     T + G
                     G + T
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C          T T
                    T     C T A C C     A
        A A        A      | + | | |     A
      T     T T T A       G G T G G     C
      G     | | | |                 T T
      G     A A A T
        T A        A     AATT
                    G   A
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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