The detailed information of tRNA gene sequence


Sequence ID>SRA1004057
Genome IDSRR002328.121245
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 277
End posion on genome 194
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
nnnnttagcT
tRNA gene sequence 
GCGCTTTTTGTCCGAGTGGTTAAGGAGCCAGATTAAGGTTCTGGTATCGCAAGATGCGAG
GGTTCGATCCCCTCAGGGCGCAAta
Downstream region at tRNA end position 
aattcttttt
Secondary structure (Cloverleaf model)
>SRA1004057	Leu	AAG
                   T      AAta aattcttttt
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T + G
                     T - A          C T
                    T     C T C C C     A
      G A G        T      | | | | |     G
    T       C C T G       G A G G G     C
    G         | +                   T T
    G       A G G A
      T T A        G     TATCGCAAGATGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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