The detailed information of tRNA gene sequence


Sequence ID>SRA1004060
Genome IDSRR002328.125317
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 229
End posion on genome 142
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaggcgtacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACCGTAAGGTACC
GAGGGTTCGAATCCCTCCCTCTCCTCCA
Downstream region at tRNA end position 
aatagtcaat
Secondary structure (Cloverleaf model)
>SRA1004060	Ser	CGA
                   c      TCCA aatagtcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTACCGTAAGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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