The detailed information of tRNA gene sequence


Sequence ID>SRA1004066
Genome IDSRR002328.128976
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 66
End posion on genome 141
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gactcgcccc
tRNA gene sequence 
GCCCTCGTAGCTCAGGGGATAGAGCGACCGCCTCCTAAGCGGTAGGTCGCAGGTTCAAAT
CCTGCCGGGGGCACGA
Downstream region at tRNA end position 
acgcctctgg
Secondary structure (Cloverleaf model)
>SRA1004066	Arg	CCT
                   c      ACGA acgcctctgg
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      G G A        A      | | | | |     A
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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