The detailed information of tRNA gene sequence


Sequence ID>SRA1004068
Genome IDSRR002328.132728
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 170
End posion on genome 99
Amino Acid Sup
Anticodon TTA
Upstream region at tRNA start position 
cagtacatta
tRNA gene sequence 
AGCCCTATGGTGTAGTGGTTAGCACAGAGGACTTTAAATCCTTTAGGCAGAGTTCGAATC
TCTGTAGGGCTAtct
Downstream region at tRNA end position 
ttttttacac
Secondary structure (Cloverleaf model)
>SRA1004068	Sup	TTA
                   a      Atct ttttttacac
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       T G T G       C A G A G     C
    G       + | | |                 T T
    T       G C A C
      T A          A     TAGG
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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