The detailed information of tRNA gene sequence


Sequence ID>SRA1004069
Genome IDSRR002328.133104
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 159
End posion on genome 234
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgacgggtgc
tRNA gene sequence 
GGGGCTGTAGCTCAGATGGGAGAGCGCTGCAATCGCACTGCAGAGGTCAGGAGTTCGATC
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
tcacccnnnn
Secondary structure (Cloverleaf model)
>SRA1004069	Ala	CGC
                   c      ACCA tcacccnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C C T C     A
      A G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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