The detailed information of tRNA gene sequence


Sequence ID>SRA1004076
Genome IDSRR002328.134882
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 121
End posion on genome 49
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
aatcacataa
tRNA gene sequence 
GAACGATTAGCTCAGTCGGTAGAGCGTGGGTCTAATAAACCCAAGGTCAGGAGTTCGATC
CTCCTATTGTTCAaac
Downstream region at tRNA end position 
ctttcttttt
Secondary structure (Cloverleaf model)
>SRA1004076	Ile	AAT
                   a      Aaac ctttcttttt
                     G - C
                     A - T
                     A - T
                     C - G
                     G + T
                     A - T
                     T - A          C T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    C       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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