The detailed information of tRNA gene sequence


Sequence ID>SRA1004084
Genome IDSRR002328.137604
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 125
End posion on genome 216
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catgtaaaca
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTCGATTGCGTCGGTCTTGAAAACCGAAAGGCCCGAAAGGGGT
CTCGGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaagaacac
Secondary structure (Cloverleaf model)
>SRA1004084	Ser	TGA
                   a      GCCA aaaagaacac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     AAGGCCCGAAAGGGGTCTCG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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