The detailed information of tRNA gene sequence


Sequence ID>SRA1004087
Genome IDSRR002328.139177
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 221
End posion on genome 294
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acttaaatcT
tRNA gene sequence 
AGAAAAATAGCTTAATTGGTAAAGCACCGATTTCCAAAATCGGTTTTATAGGTTCAAGTC
CTTTTTTTTTTGTag
Downstream region at tRNA end position 
gtttacggtc
Secondary structure (Cloverleaf model)
>SRA1004087	Trp	CCA
                   T      GTag gtttacggtc
                     A - T
                     G + T
                     A - T
                     A - T
                     A - T
                     A - T
                     A - T          T G
                    T     T T T C C     A
      T A A        A      |   | | |     A
    T       T T C G       A T A G G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     TTTT
                    C - G
                    C - G
                    G - C
                    A - T
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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