The detailed information of tRNA gene sequence


Sequence ID>SRA1004092
Genome IDSRR002328.143093
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 115
End posion on genome 189
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttttgcac
tRNA gene sequence 
CGCGAAGTAGAGCAGCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCGATCC
CTCTCTTCGCAACTA
Downstream region at tRNA end position 
aaaaaaggtt
Secondary structure (Cloverleaf model)
>SRA1004092	Met	CAT
                   c      ACTA aaaaaaggtt
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C T
                    T     T C T C C     A
        G A        A      | | | | |     G
      C     C G A G       A G A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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