The detailed information of tRNA gene sequence


Sequence ID>SRA1004096
Genome IDSRR002328.146129
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 220
End posion on genome 148
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tttgcaaaac
tRNA gene sequence 
GTTCTCGTAGTTCAATGGATAGAATTATGGCCTCCGAAGCCGTCGATATGAGTTCGAATC
TCATCGGGAACACtg
Downstream region at tRNA end position 
gtagcaaccg
Secondary structure (Cloverleaf model)
>SRA1004096	Arg	CCG
                   c      ACtg gtagcaaccg
                     G - C
                     T - A
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T A C T C     A
      T A A        A      | | | | |     G
    G       C T T G       A T G A G     C
    G       | | | +                 T T
    A       G A A T
      T A          T     CGAT
                    A - T
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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