The detailed information of tRNA gene sequence


Sequence ID>SRA1004100
Genome IDSRR002328.147804
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 30
End posion on genome 106
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gcaaaacgtg
tRNA gene sequence 
GTGGGTTTAGCTCAGTCGGTTAGAGCGCCGCTCTGTGGAAGCGGAGGCCGGGGGTTCAAG
TCCCCTAATCCACCCCA
Downstream region at tRNA end position 
aacagaacac
Secondary structure (Cloverleaf model)
>SRA1004100	His	GTG
                   g      CCCA aacagaacac
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A          T G
                    T     T C C C C     A
      T G A        A      + | | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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