The detailed information of tRNA gene sequence


Sequence ID>SRA1004107
Genome IDSRR002328.151622
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 122
End posion on genome 195
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acgtctcgcc
tRNA gene sequence 
GCCCCCTTAGCTCAGTCGGCAGAGCGTCTCCATGGTAAGGAGAAGGTCTACGGTTCGATT
CCGTAAGGGGGCTCgg
Downstream region at tRNA end position 
cctgcgggtc
Secondary structure (Cloverleaf model)
>SRA1004107	Thr	GGT
                   c      TCgg cctgcgggtc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     A T G C C     A
      T G A        A      | | | | |     G
    C       C T C G       T A C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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