The detailed information of tRNA gene sequence


Sequence ID>SRA1004109
Genome IDSRR002328.151949
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 141
End posion on genome 211
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagaaactaa
tRNA gene sequence 
GGTGTAATCGTCCAGTGGAAGGACAGGTGATTCCAAACCATCAAACCGGGGTTCGATTCC
TCGTTACGCCAtta
Downstream region at tRNA end position 
tttttaccgt
Secondary structure (Cloverleaf model)
>SRA1004109	Trp	CCA
                   a      Atta tttttaccgt
                     G - C
                     G - C
                     T + G
                     G - C
                     T - A
                     A - T
                     A - T          T T
                    T     G C T C C     A
        G A        C      | | + | |     G
      T     C C T G       C G G G G     C
      G     | | | |                 T T
      G     G G A C
        A A        A     AAAC
                    G - C
                    G + T
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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