The detailed information of tRNA gene sequence


Sequence ID>SRA1004112
Genome IDSRR002328.155586
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 181
End posion on genome 253
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagaatataT
tRNA gene sequence 
GCGCCTATCGTCCAATGGTAGGACGACGGTCTCCAAAACCGTTAATCTGGGTTCAAGTCC
TAGTGGGCGCGTtt
Downstream region at tRNA end position 
ttataattta
Secondary structure (Cloverleaf model)
>SRA1004112	Trp	CCA
                   T      GTtt ttataattta
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G A T C C     A
        A A        C      | | + | |     A
      T     C C T G       C T G G G     C
      G     | | | |                 T T
      G     G G A C
        T A        G     TAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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