The detailed information of tRNA gene sequence


Sequence ID>SRA1004114
Genome IDSRR002328.155650
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 6
End posion on genome 90
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnaaaaa
tRNA gene sequence 
GCCCGGGTGGCGAAATTGGTAGACGCACTGCCTTCAGGTGGCAGCGTTCGTAAGGATGTG
CTGGTTCGAATCCAGTCCCGGGTACtt
Downstream region at tRNA end position 
aaaaaacctt
Secondary structure (Cloverleaf model)
>SRA1004114	Leu	CAG
                   a      ACtt aaaaaacctt
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      T A A        G      + | | | |     G
    T       A G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGTTCGTAAGGATGT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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