The detailed information of tRNA gene sequence


Sequence ID>SRA1004117
Genome IDSRR002328.156551
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 164
End posion on genome 240
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actattccac
tRNA gene sequence 
GGGGGCGTAGTTAAGTTGGTTATAACGTCTGCCTGTCACGCAGAAGGCCGAGGGTTCGAG
TCCCTTCGCTCCCGCCA
Downstream region at tRNA end position 
ttttaaagta
Secondary structure (Cloverleaf model)
>SRA1004117	Asp	GTC
                   c      GCCA ttttaaagta
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       A T T G       G A G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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