The detailed information of tRNA gene sequence


Sequence ID>SRA1004122
Genome IDSRR002328.158594
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 51
End posion on genome 140
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatcgacccc
tRNA gene sequence 
GGAACCGTGTCCGAGCGGCCGAAGGTGCAACTCTCGAAAAGTTGTGTGGGTGAGAGCCCA
CCGTGGGTTCAAATCCCACCGGTTCCGCTA
Downstream region at tRNA end position 
ttaaaatgct
Secondary structure (Cloverleaf model)
>SRA1004122	Ser	CGA
                   c      GCTA ttaaaatgct
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTGGGTGAGAGCCCACC
                    C - G
                    A - T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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