The detailed information of tRNA gene sequence


Sequence ID>SRA1004129
Genome IDSRR002328.162367
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 168
End posion on genome 244
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagaaaatta
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCAAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttccccttgt
Secondary structure (Cloverleaf model)
>SRA1004129	Asp	GTC
                   a      GCCA ttccccttgt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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