The detailed information of tRNA gene sequence


Sequence ID>SRA1004130
Genome IDSRR002328.163906
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 165
End posion on genome 240
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttggagt
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGTAGAGTTACGGACTCCAAATCCGTCGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
gttttaccga
Secondary structure (Cloverleaf model)
>SRA1004130	Trp	CCA
                   t      GCCA gttttaccga
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          T     CGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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