The detailed information of tRNA gene sequence


Sequence ID>SRA1004133
Genome IDSRR002328.165032
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 144
End posion on genome 71
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttaggagtt
tRNA gene sequence 
GGCGCCTTGGCGGAGTGGTTACGCAGCGGTCTGCAAAACCGCGTACACCGGTTCGAACCC
GGTAGGTGCCTCCA
Downstream region at tRNA end position 
aactttcaaa
Secondary structure (Cloverleaf model)
>SRA1004133	Cys	GCA
                   t      TCCA aactttcaaa
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     C - G
                     T - A          C A
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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